Janine Gote-Schniering

Work

Bern University Hospital & University of Bern

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Group Leader

Switzerland

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Helmholtz Center Munich

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Postdoctoral Researcher

Germany

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University Hospital Zurich

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Postdoctoral Researcher

Switzerland

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Education

ETH Zurich

Switzerland
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Dr. sc. ETH Zurich

Johannes Gutenberg University Mainz

Germany
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M.Sc. in Biomedicine

Johannes Gutenberg University Mainz

Germany
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B.Sc. in Biology

Publications

Single cell decomposition of multicellular aging programs associated with impaired lung regeneration

preprint

Cold storage of human precision-cut lung slices in TiProtec preserves cellular composition and transcriptional responses and enables on-demand mechanistic studies.

Respiratory research

journal-article

Automated AI-based image analysis for quantification and prediction of interstitial lung disease in systemic sclerosis patients.

Respiratory research

journal-article

From images to clinical insights: an educational review on radiomics in lung diseases.

Breathe (Sheffield, England)

journal-article

Dextromethorphan inhibits collagen and collagen-like cargo secretion to ameliorate lung fibrosis.

Science translational medicine

journal-article

Influence of Microenvironmental Orchestration on Multicellular Lung Alveolar Organoid Development from Human Induced Pluripotent Stem Cells.

Stem cell reviews and reports

journal-article

Radiomics on slice-reduced versus full-chest computed tomography for diagnosis and staging of interstitial lung disease in systemic sclerosis: A comparative analysis.

European journal of radiology open

journal-article

Radioproteomics stratifies molecular response to antifibrotic treatment in pulmonary fibrosis

JCI Insight

journal-article

Cell circuits underlying nanomaterial specific respiratory toxicology

preprint

Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multilineage cell circuit dynamics in human lung fibrogenesis

Science Translational Medicine

journal-article

Multilineage circuits of regenerative cell states

Cell Stem Cell

journal-article

Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome.

Nature methods

journal-article

An integrated cell atlas of the lung in health and disease

Nature Medicine

journal-article

Transferability of radiomic signatures from experimental to human interstitial lung disease.

Frontiers in medicine

journal-article

Spatial ECM proteomics resolves instructive tissue niches in the distal human lung

03.01 - Molecular pathology and functional genomics

conference-abstract

The discovAIR project: a roadmap towards the Human Lung Cell Atlas.

The European respiratory journal

journal-article

Reply to: The potential and challenges of radiomics in uncovering prognostic and molecular differences in interstitial lung disease associated with systemic sclerosis

European Respiratory Journal

journal-article

Computed tomography-based radiomics decodes prognostic and molecular differences in interstitial lung disease related to systemic sclerosis

European Respiratory Journal

journal-article

Resolving the Cellular Programs of Lung Aging in Pulmonary Fibrosis at Single-Cell Resolution

C109. PULMONARY FIBROSIS: MOVING FORWARD WITH GENETICS AND SEQUENCING

conference-abstract

CellRank for directed single-cell fate mapping.

Nature methods

journal-article

Elevated Fibronectin Levels in Profibrotic CD14+ Monocytes and CD14+ Macrophages in Systemic Sclerosis.

Frontiers in immunology

journal-article

Staphylococcus aureus impairs dermal fibroblast functions with deleterious effects on wound healing.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology

journal-article

OP0150 MACHINE LEARNING APPROACHES FOR RISK MODELLING IN INTERSTITIAL LUNG DISEASE ASSOCIATED WITH SYSTEMIC SCLEROSIS USING HIGH DIMENSIONAL IMAGE ANALYSIS

Annals of the Rheumatic Diseases

conference-abstract

POS0866 TWO-DIMENSIONAL HRCT-BASED RADIOMIC FEATURES IN SSC-ILD DISTINGUISH DRUG RESPONDERS FROM NON-RESPONDERS

Annals of the Rheumatic Diseases

conference-abstract

Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers.

EMBO molecular medicine

journal-article

Impact of CT convolution kernel on robustness of radiomic features for different lung diseases and tissue types.

The British journal of radiology

journal-article

Applicability of radiomics in interstitial lung disease associated with systemic sclerosis: proof of concept.

European radiology

journal-article

Long noncoding RNA H19X is a key mediator of TGF-β-driven fibrosis.

The Journal of clinical investigation

journal-article

Serum metabolites as biomarkers in systemic sclerosis-associated interstitial lung disease

Scientific reports

journal-article

18F-AzaFol for Detection of Folate Receptor-β Positive Macrophages in Experimental Interstitial Lung Disease-A Proof-of-Concept Study.

Frontiers in Immunology

journal-article

Visualisation of interstitial lung disease by molecular imaging of integrin αvβ3 and somatostatin receptor 2.

Annals of the rheumatic diseases

journal-article

In Vivo Labeling of Plasma Proteins for Imaging of Enhanced Vascular Permeability in the Lungs.

Molecular pharmaceutics

journal-article

Evaluation of 99mTc-rhAnnexin V-128 SPECT/CT as a diagnostic tool for early stages of interstitial lung disease associated with systemic sclerosis.

Arthritis research & therapy

journal-article

Tie2 as a novel key factor of microangiopathy in systemic sclerosis.

Arthritis research & therapy

journal-article

Systemic sclerosis: The need for structured care.

Best practice & research. Clinical rheumatology

journal-article